Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933041.1_cds_XP_016479444.1_70988
CDS Infomation

[gene=LOC107800736] [db_xref=GeneID:107800736] [protein=pentatricopeptide repeat-containing protein At3g03580-like] [protein_id=XP_016479444.1] [location=16035..17843] [gbkey=CDS]
Sequence

ATGGGAAGAGTTAAACATGCAGATAATCTGTTTGAGAAAATGCCTGAGAAGAATGTAGTT
ATTTGGTCAATCATGGTCCATGGTTATTCTAAAAATGGGCTACACAAAAAATCAGTTGAA
TGCTTCATCTCAATGAGAAATATTGGTTTAATGCCAAATTCATTCACCATTGTAGGTATT
CTTGTGGGGGTCTCAGAATTGAGGGACTTAATACTTGGTCAATCAGTTCATGGACTGATA
GTGAAGTTAGGGTGGGAAGATTATTCATTTGTTGGCACTTCCCTTCTTGAGGTTTATGCA
AAATGTGGAAATATCATTGACTGTAGTAAGATCTTTGAGAACTTAAAAGGTCAAGGTCTT
GTTCCATGGAATGCAATGATCAGTGCATTTGTACATAATGAACTCTATGAAGAGGCTTTC
TTGTTATGCAATAGGTCTCGGAAGTCTGGTTTATTTCCTGATTCAATGACAGCATTGGCA
TTGATACAGAGCTGTGTGGCTATGGAATCTAAATGTCTTTGTGAATCGGTTCATGCTATG
GTTTTAAAATTTGGTCTTGTATCTCATGTACAGGTGAATAACTCACTTCTTTTTCTGTAC
TCAAGTTTGATGGAGTTACCTGCTGTTTGGGAAATTTTCAATCCAATGGAAGAGAAAGAT
GTTATCAGTTGGTCAACAGTGATGAGTTTACTGGTTCACCTTGAATATGCTTCGGACGCT
ATAAAGCTTTTCTTCCATATGAGAGATTCAGGGAATGAGTATGACAAGCTCGTCCTAATG
AATCTGATTTCAGCTTGTGGAACTTTAGGGAACTTGAAGATGGGAAAATCTGTCCATGCT
CAAGTAATAACTCATGGTTTTGGATCAGATCTTCCTCTACTTAATACAATGATTACTATG
TATGCAAGATGTGAGGACTTGAATTCTTCAAAAACTGTTTTCTATCGATCAACTATGAAG
AGTATGGTATCATGGACATCTATCATTTCAGGACTTCTCCATAATGGAAGGCCGAGAGAG
GCACTAGATATGTTCGTTCGCGTTAGAATTGAAGAAAACATAATCACTGATTCGGTAGTT
CTGGTGAGTGCACTAGCTGCTGGTGGTGAAATGGTTGATTTGGAACTCTGCATGCAGCTT
CATTGCCATACTATAAAAGCTGGGCTTACAAATTATACAAGTATTCAGAACTGTCTCATA
TCAACCTACTCAAAGTGTGGGGATGTTGAACCTGCAAACAATGTTTTCGTGCAAATGGCA
TCTTTTCGCGATATTGTATCATGGAATGCTATTATAAACGGATATGGTATCAATGGCCAC
GGAGAAACTGCTCTCTCCCTTTTCTATGAGTTCAAAAAGACGGGAGGAATACCTGATATT
GCTACTTACTTGATCATTTTGAGTGCTTGTAGTCATTCAGGATTGGTTAGCGAAGGGTTG
TTGATTTTCAGCCAAATAATAGAAGAAAATAGAATCAGAGTTGGTGCAGAACATTATAGC
TGTGTAGCTAATTTGCTTGCCCGGGCAGGGTATTTACCTGATGTAAGTAAGTTCAAGGAT
GGAGAAGGTAAGGCTATTTGGAGGGCTATATTAAACGGATGCGTGCATAATGGTGATCTA
AGATTAGCAGAATTTGCCGCGAAAAAGTTTGATGAGCTGATTCAAAAAGATTCTGGTCAG
CTTGTGTTACTCTCAAATCTTTATGCATCGGTTGGGAGATTTCAGGATGCAGAAGCCTTG
AGGTTGAGCATGGAGACTGAGAAACTGATTAAAGATCCAGGATTCAGCATTCTCACTGGA
AATCTATAG

Peptide Sequence

PEP ID

XP_016479444.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g03580-like [Nicotiana tabacum]
Sequence

MGRVKHADNLFEKMPEKNVVIWSIMVHGYSKNGLHKKSVECFISMRNIGLMPNSFTIVGI
LVGVSELRDLILGQSVHGLIVKLGWEDYSFVGTSLLEVYAKCGNIIDCSKIFENLKGQGL
VPWNAMISAFVHNELYEEAFLLCNRSRKSGLFPDSMTALALIQSCVAMESKCLCESVHAM
VLKFGLVSHVQVNNSLLFLYSSLMELPAVWEIFNPMEEKDVISWSTVMSLLVHLEYASDA
IKLFFHMRDSGNEYDKLVLMNLISACGTLGNLKMGKSVHAQVITHGFGSDLPLLNTMITM
YARCEDLNSSKTVFYRSTMKSMVSWTSIISGLLHNGRPREALDMFVRVRIEENIITDSVV
LVSALAAGGEMVDLELCMQLHCHTIKAGLTNYTSIQNCLISTYSKCGDVEPANNVFVQMA
SFRDIVSWNAIINGYGINGHGETALSLFYEFKKTGGIPDIATYLIILSACSHSGLVSEGL
LIFSQIIEENRIRVGAEHYSCVANLLARAGYLPDVSKFKDGEGKAIWRAILNGCVHNGDL
RLAEFAAKKFDELIQKDSGQLVLLSNLYASVGRFQDAEALRLSMETEKLIKDPGFSILTG
NL

Transcript Sequence

Gene sequence data has not been registered.